BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F04LP1|AL426710
(816 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1478 1610 0.0
>3x_Contig1478
Length = 9651
Score = 1610 bits (812), Expect = 0.0
Identities = 815/816 (99%)
Strand = Plus / Plus
Query: 1 atcaatcaagaaaacacataatatatatatatatatcgaaatccccagataacaacattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2822 atcaatcaagaaaacacataatatatatatatatatcgaaatccccagataacaacattg 2881
Query: 61 tttctgaaagttcaaataatgcataaagtagcaccgacggcacacttggtaactatttgg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2882 tttctgaaagttcaaataatgcataaagtagcaccgacggcacatttggtaactatttgg 2941
Query: 121 cggaggtagcatagaggaaaacgttcaaaagtaccaagagactacctgaagaacttaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2942 cggaggtagcatagaggaaaacgttcaaaagtaccaagagactacctgaagaacttaatg 3001
Query: 181 gggaatttacccagtcattccaacagaccacatcacaaacatccatcaactatgtctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3002 gggaatttacccagtcattccaacagaccacatcacaaacatccatcaactatgtctcag 3061
Query: 241 aacgttaaagatgtctctatggttgacatcaatgaagctatgaatgaaagacaggatgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3062 aacgttaaagatgtctctatggttgacatcaatgaagctatgaatgaaagacaggatgac 3121
Query: 301 acttcaaataaggtcgaaaccccaggagcatcctcgaaccttacccaatctctatcacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3122 acttcaaataaggtcgaaaccccaggagcatcctcgaaccttacccaatctctatcacaa 3181
Query: 361 atgaacattgatgacagaaatgagttaacaccacagctttcatccagaaaatccacgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3182 atgaacattgatgacagaaatgagttaacaccacagctttcatccagaaaatccacgttg 3241
Query: 421 atatttaatgacgacttcgatgatatttcgaatcagcataagcacattgaacaccagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3242 atatttaatgacgacttcgatgatatttcgaatcagcataagcacattgaacaccagaat 3301
Query: 481 aattacgacgacggaagaatcatcactgacaatgaagatgaggatgaggatgttgtgaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3302 aattacgacgacggaagaatcatcactgacaatgaagatgaggatgaggatgttgtgaat 3361
Query: 541 aatatcataacaggaccctctgatggatctgcatcctcgctttcagcagattcgccagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3362 aatatcataacaggaccctctgatggatctgcatcctcgctttcagcagattcgccagct 3421
Query: 601 gccagttcacacagcgaagatggaagacatcaaaattcagcatacactaacaactctcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3422 gccagttcacacagcgaagatggaagacatcaaaattcagcatacactaacaactctcaa 3481
Query: 661 gaacaacatgccaacaaagtttcaggaaatcattacgatgggaacgtacaacatccaggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3482 gaacaacatgccaacaaagtttcaggaaatcattacgatgggaacgtacaacatccaggc 3541
Query: 721 cctgctattaatcagcagacgcaaccggtacctgaacgtagacctaccatggttcctgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3542 cctgctattaatcagcagacgcaaccggtacctgaacgtagacctaccatggttcctgtt 3601
Query: 781 gagataacgtggcaacaaggcggttccaaggtctat 816
||||||||||||||||||||||||||||||||||||
Sbjct: 3602 gagataacgtggcaacaaggcggttccaaggtctat 3637
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,043
Number of Sequences: 1807
Number of extensions: 10043
Number of successful extensions: 1210
Number of sequences better than 1.0e-20: 1
length of query: 816
length of database: 10,358,551
effective HSP length: 16
effective length of query: 800
effective length of database: 10,329,639
effective search space: 8263711200
effective search space used: 8263711200
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)